Bayesian Computation with R (Use R)

  Author:    Jim Albert
  ISBN:    0387713840
  Sales Rank:    24071
  Published:    2007-07-27
  Publisher:    Springer
  # Pages:    280
  Binding:    Paperback
  Avg. Rating:    4.0 based on 3 reviews
  Used Offers:    9 from $39.04
  Amazon Price:    $44.95
  (Data above last updated:  2008-09-06 03:23:30 EST)
  
  
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Bayesian Computation with R (Use R)
  

There has been a dramatic growth in the development and application of Bayesian inferential methods. Some of this growth is due to the availability of powerful simulation-based algorithms to summarize posterior distributions. There has been also a growing interest in the use of the system R for statistical analyses. R's open source nature, free availability, and large number of contributor packages have made R the software of choice for many statisticians in education and industry.

Bayesian Computation with R introduces Bayesian modeling by the use of computation using the R language. The early chapters present the basic tenets of Bayesian thinking by use of familiar one and two-parameter inferential problems. Bayesian computational methods such as Laplace's method, rejection sampling, and the SIR algorithm are illustrated in the context of a random effects model. The construction and implementation of Markov Chain Monte Carlo (MCMC) methods is introduced. These simulation-based algorithms are implemented for a variety of Bayesian applications such as normal and binary response regression, hierarchical modeling, order-restricted inference, and robust modeling. Algorithms written in R are used to develop Bayesian tests and assess Bayesian models by use of the posterior predictive distribution. The use of R to interface with WinBUGS, a popular MCMC computing language, is described with several illustrative examples.

This book is a suitable companion book for an introductory course on Bayesian methods. Also the book is valuable to the statistical practitioner who wishes to learn more about the R language and Bayesian methodology. The LearnBayes package, written by the author and available from the CRAN website, contains all of the R functions described in the book.

                  Reader Reviews 1 - 3 of 3                 
  
  
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08-16-08 2 11\11
(Hide Review...)  Another R Book
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First the good: The first three chapters gives the reader a nice introduction to using R for Bayesian statistics and some well worked out examples: a necessity when dealing with a program that one is unfamiliar with. The text does a decent job of complementing the material found in another text on basic Bayesian methodology such as Gelman et al. (2004) or Carlin and Lewis (2008).

The Bad: Towards the latter half of the text the author begins to use a program from the 'Learn Bayes' package entitled "Laplace". It is of my belief that this black box is faulty and very badly behaved. Many of the examples from the text as well as exercises from the sections would not run simply because of this black box. None of nine graduate students working together and independently were able to get this function to perform its duties on a regular basis.

The Ugly: Use of a black box programming technique does nothing more than to add to confusion of how Bayesian methodology works and does not give the reader an adequate background on how to program R to perform Bayesian methods. Black box usage trains a budding statistician to point, click, type, and look at results without really giving them the necessary tools to know if what they are view is even reasonable or what they wanted in the first place.

Conclusions: Decent at first; weak at the last. Would not purchase again as a reference to R.
(Review Data Last Updated: 2008-09-06 03:26:11 EST)
07-01-08 5 3\5
(Hide Review...)  Fantastic Resource
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Great book. If you work through the examples, this book will move you to very near the top of the R learning curve and, more importantly, race you to the peak of the Bayesian curve.
(Review Data Last Updated: 2008-08-17 06:29:41 EST)
08-14-07 5 32\41
(Hide Review...)  more practicality added to Bayesian inference
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Jim Albert is a great teacher and an excellent writer. The R language is becoming one of the most used languages by statistical researchers. This is because it has many similarities to S and can be used freely, Jim makes R easy to learn for statisticians in this book. One of the big breakthroughs in Bayesian statistics over the past 2 decades was the implementation of complicated priors and hierarchical models through the Markov Chain Monte Carlo (MCMC) algorithms. The leaders is this filed created free software called BUGS (for Bayesian Analysis Using Gibbs Sampling). Gibbs sampling is one of the most commonly used MCMC algorithms. Statisticians using this software have been able to provide more satisfactory solutions to many basic and complex problems using these tools. After Windows became the dominant operating system on personal computers WINBUGS was born. This is a version of BUGS that uses Windows as the operating system and takes advantage of Windows many nice features. Now for the first time to my knowledge Jim Albert show the reader how to incorporate the BUGS technology in the framework of R programming. This can only add to the practical use of Bayesian methods among statisticians for research that advances both the theory and applications. In the late 1990s I was working in the medical device industry where a number of clinical trials were being analyzed using the MCMC methods. Jim deserves a great deal of credit for moving Bayesian statistics into the framework of R!
(Review Data Last Updated: 2008-07-15 08:17:22 EST)
  
                  Reader Reviews 1 - 3 of 3                 
  
  
  
  
  
  

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